Analysis Tools and Software

IUCN Red-listing Tools : An R package that includes algorithms to facilitate the assessment of extinction risk of species according to the IUCN (International Union for Conservation of Nature, see http://www.iucn.org for more information) red list criteria developed by University of Helsinki.

Download: https://CRAN.R-project.org/package=red

Manual: https://cran.r-project.org/web/packages/red/red.pdf

 

Statistical Tool for Agricultural Research, or STAR Developed By IRRI. : STAR is a complete data management package that provides statistical analyses of experimental data. Its main modules and facilities are data management with a spreadsheet, descriptive statistics, analysis of variance, correlation and linear regression analysis, randomization with layout and electronic field book, and non-parametric data analysis. STAR runs on the Windows operating systems and has a user-friendly interface where options are accessible via drop-down menus. It uses the Eclipse Rich Client Platform (RCP) for the graphical interface and R language for statistical computing and graphics. STAR version 1.0 may be downloaded from http://bbi.irri.org/.  Comments or suggestions are welcome and can be sent to STAR.bbi@irri.org.

 

STAR package : Instillation procedure

 

Download link : STAR 2.0.1

 

 

IBM SPSS Statistics : IBM SPSS Statistics can process are limited, but cover most of the commonly used services. Spreadsheets from MS Excel or OpenOffice, Plain text files such as .txt or .csv, SQL databases, SAS, and Stata. Thanks to the variety of information that can be handled, the service is great for professional use or personal projects.

Download link: SPSS Statistice

Tutorial SPSS : What is SPSS ?

 

 

RStudio Programing : RStudio is an integrated development environment (IDE) for R, a programming language for statistical computing and graphics. It is available in two formats: RStudio Desktop is a regular desktop application while RStudio Server runs on a remote server and allows accessing RStudio using a web browser.

 

Download sites : RStudio

 

 

Molecular Evolutionary Genetics Analysis : MEGA is an integrated tool for conducting automatic and manual sequence alignment, inferring phylogenetic trees, mining web-based databases, estimating rates of molecular evolution, and testing evolutionary hypotheses. 

 

Download sites: MEGA software